CLUSTER 1

AAACTACAAC = NA

AGAACTACAA = NA

GGAACTACAA = NA

   CLUSTER 2

AAGGAGGAGG = NA

AGAAGGAGGA = NA

AGAGGAGGAG = NA

AGGAGGAGGA = NA

CCTCCTCTCC = NA

CCTCCTCTTC = NA

GAGAGGAGGA = NA

GGAGGAGGCC = NA

   CLUSTER 3

AGGAAGGAGG = NA

CCCTCCTTCC = NA

CCTCCTTCCC = NA

   CLUSTER 4

AGGAAGGGGC = NA

AGGAAGGGGG = NA

CCCCCCTTCC = NA

   CLUSTER 5

AGGCAGGAAG = NA

GGGGCAGGAA = NA

   CLUSTER 6

AGGGAGGAAG = NA

CCCTTCCTCC = NA

CCTTCCTCCC = NA

CGGGGAGGAA = NA

   CLUSTER 7

AGGGAGGAGC = NA

   CLUSTER 8

ATCCCTCCGC = NA

   CLUSTER 9

CAAAATGGCG = NA

   CLUSTER 10

CACCACCACC = NA

   CLUSTER 11

CACTGCGCAG = NA

   CLUSTER 12

CAGCCCCGGG = NA

CCAGCCCCAG = NA

   CLUSTER 13

CCCACCCTCC = NA

   CLUSTER 14

CCCCTTTAAG = NA

CCCTTTAAGA = NA

CCCTTTAAGG = NA

CCTTTAAGAG = NA

GCCCCTTTAA = NA

GGCCCCTTTA = NA

GGCCCTTTAA = NA

   CLUSTER 15

CCCGGAAGCA = NA

   CLUSTER 16

CTCCTGCCCC = NA

   CLUSTER 17

GCCATGGCCC = NA

GCCCAGGCCC = NA

   CLUSTER 18

GCTCAGCCCC = NA

   CLUSTER 19

GGAGGAGAGA = NA

   CLUSTER 20

GGCCACACCC = NA

   CLUSTER 21

GGGAAACTGA = NA

   CLUSTER 22

GGGAGGAGGA = NA

   CLUSTER 23 - CTCF

M00001 = MyoD

M00693 = E12

M00993 = TAL1

M01200 = CTCF

MA0055 = Myf

   CLUSTER 24

M00005 = AP-4

M00698 = HEB

   CLUSTER 25 - (ETS-box)

M00007 = Elk-1

M00016 = E74A

M00025 = Elk-1

M00032 = c-Ets-1(p54)

M00108 = NRF-2/GABP

M00339 = c-Ets-1

M00340 = c-Ets-2

M00341 = GABP

M00678 = Tel-2

M00771 = Ets

M01078 = c-Ets-1

M01163 = Elk-1

M01165 = Elk-1

M01167 = SAP-1a

M01203 = PU1

M01204 = SPI-B

M01208 = FLI1

MA0062 = GABPA

MA0076 = ELK4

   CLUSTER 26

M00009 = Ttk

   CLUSTER 27

M00014 = repressor

   CLUSTER 28 - (CRE-box)

M00017 = ATF

M00036 = v-Jun

M00039 = CREB

M00041 = ATF2:c-Jun

M00113 = CREB

M00177 = CREB

M00178 = CREB

M00179 = ATF2

M00338 = ATF

M00357 = bZIP910

M00513 = ATF3

M00514 = ATF4

M00691 = ATF1

M00916 = CREB

M00917 = CREB

M00981 = CREB,

M01186 = STF1

M01187 = STF1

MA0018 = CREB1

   CLUSTER 29

M00026 = RSRFC4

M00231 = MEF-2

M00232 = MEF-2

M00407 = RSRFC4

M00941 = MEF-2

MA0052 = MEF2A

   CLUSTER 30 - (AP1)

M00037 = NF-E2

M00038 = GCN4

M00188 = AP-1

M00199 = AP-1

M00204 = GCN4

M00490 = Bach2

M00495 = Bach1

M00517 = AP-1

M00821 = Nrf-2

M00983 = MAF

   CLUSTER 31

M00046 = GCR1

M00658 = PU.1

   CLUSTER 32 - NFKB1

M00051 = NF-kappaB

M00052 = NF-kappaB

M00053 = c-Rel

M00054 = NF-kappaB

M00194 = NF-kappaB

M00208 = NF-kappaB

M00774 = NF-kappaB

M01223 = P50:P50

M01224 = P50:RELA-P65

MA0022 = dl_1

MA0023 = Dl_2

MA0061 = NF-kappaB

MA0101 = REL

MA0107 = RELA

   CLUSTER 33

M00058 = HEN1

M00068 = HEN1

MA0048 = NHLH1

   CLUSTER 34 - Interferon stimulus response element (ISRE)

M00062 = IRF-1

M00063 = IRF-2

M00258 = ISGF-3

M00699 = ICSBP

M01066 = BLIMP1

MA0050 = IRF1

MA0051 = IRF2

MA0137 = STAT1

   CLUSTER 35 - YY1

M00069 = YY1

M00651 = NF-muE1

M00793 = YY1

M01035 = YY1

   CLUSTER 36

M00072 = CP2

   CLUSTER 37

M00084 = MZF1

MA0057 = MZF1_5-13

   CLUSTER 38

M00111 = CF1

M00112 = CF1

MA0016 = usp

   CLUSTER 39 - (E-box)

M00118 = c-Myc:Max

M00119 = Max

M00121 = USF

M00182 = GBP

M00187 = USF

M00220 = SREBP-1

M00236 = Arnt

M00303 = CBF1

M00366 = EmBP-1

M00367 = HBP-1a

M00368 = CPRF-1

M00369 = TAF-1

M00370 = CPRF-3

M00375 = TGA1b

M00435 = PIF3

M00440 = CG1

M00441 = GBF

M00442 = ABF

M00539 = Arnt

M00615 = c-Myc:Max

M00796 = USF

M00942 = CPRF-1

M00943 = TAF-1

M00944 = CPRF-3

M00946 = TGA1b

M00985 = Stra13

M01034 = Ebox

M01116 = CLOCK:BMAL

M01145 = c-Myc

MA0058 = MAX

MA0059 = MYC-MAX

   CLUSTER 40

M00139 = AhR

   CLUSTER 41

M00143 = Pax-5

MA0014 = Pax5

   CLUSTER 42

M00171 = Adf-1

M00923 = Adf-1

M01219 = SP1:SP3

   CLUSTER 43 - NFYA:NFYB (CCAAT-box)

M00185 = NF-Y

M00209 = NF-Y

M00254 = CCAAT

M00287 = NF-Y

M00288 = HAP2/3/4

M00309 = ACAAT

M00687 = alpha-CP1

M00775 = NF-Y

MA0060 = NFYA

   CLUSTER 44 - SRF

M00186 = SRF

M00215 = SRF

M00922 = SRF

M01007 = SRF

MA0083 = SRF

   CLUSTER 45 - SP1 (GC-box)

M00196 = Sp1

M00255 = GC

M00491 = MAZR

M00649 = MAZ

M00807 = Egr

M00931 = Sp1

M00932 = Sp1

M00933 = Sp1

M00982 = KROX

M01068 = UF1H3BETA

M01122 = ZNF219

M01175 = CKROX

MA0079 = SP1

   CLUSTER 46 - OCT1

M00210 = OCT-x

M00342 = Oct-1

M00795 = Octamer

   CLUSTER 47

M00247 = PacC

   CLUSTER 48 - NRSF

M00256 = NRSF

M00325 = NRSE

M01028 = NRSF

MA0138 = REST

   CLUSTER 49 - EBF1

M00261 = Olf-1

   CLUSTER 50 - ZNF143

M00262 = Staf

M00264 = Staf

MA0088 = Staf

   CLUSTER 51

M00277 = Lmo2

M00414 = AREB6

   CLUSTER 52

M00279 = MIF-1

M00280 = RFX1

   CLUSTER 53

M00281 = RFX1

   CLUSTER 54

M00319 = MEF-3

   CLUSTER 55

M00321 = Muscle

M00323 = Muscle

M00324 = Muscle

   CLUSTER 56

M00329 = Pax-9

   CLUSTER 57 - E4F1

M00356 = bZIP910

M00358 = bZIP911

M00483 = ATF6

M00694 = E4F1

M00697 = HBP-1b

M00936 = HBP-1a

   CLUSTER 58

M00388 = FACB

M00390 = FACB

   CLUSTER 59

M00411 = HNF4alpha1

M00762 = PPAR,

M00764 = HNF4

M01031 = HNF4

M01036 = COUPTF

   CLUSTER 60

M00457 = STAT5A

   CLUSTER 61

M00466 = HIF1

   CLUSTER 62

M00479 = Alfin1

   CLUSTER 63

M00507 = TRAB1

   CLUSTER 64

M00634 = GCM

   CLUSTER 65

M00647 = LXR

   CLUSTER 66

M00650 = MTF-1

   CLUSTER 67

M00652 = NRF-1

   CLUSTER 68

M00654 = OSBZ8

   CLUSTER 69

M00665 = Sp3

   CLUSTER 70

M00706 = TFII-I

   CLUSTER 71

M00722 = core-binding

M00769 = AML

M00984 = PEBP

   CLUSTER 72

M00727 = SF1

   CLUSTER 73

M00733 = SMAD4

   CLUSTER 74

M00737 = E2F-1:DP-2

M00739 = E2F-4:DP-2

M01114 = E2F

   CLUSTER 75

M00788 = EmBP-1b

MA0128 = EMBP1

   CLUSTER 76

M00800 = AP-2

   CLUSTER 77

M00804 = E2A

   CLUSTER 78

M00915 = AP-2

   CLUSTER 79

M00919 = E2F

   CLUSTER 80

M00948 = PCF2

   CLUSTER 81

M00952 = PCF5

   CLUSTER 82

M00958 = ABI4

   CLUSTER 83

M00966 = VDR,

   CLUSTER 84

M00997 = DEC

   CLUSTER 85

M01002 = DEAF1

   CLUSTER 86

M01009 = HES1

   CLUSTER 87

M01043 = Nkx2-5

   CLUSTER 88

M01045 = AP-2alphaA

M01047 = AP-2alphaA

   CLUSTER 89

M01054 = bHLH66

   CLUSTER 90

M01139 = LMAF

   CLUSTER 91

M01180 = SPL14

   CLUSTER 92

M01214 = ESE1

   CLUSTER 93

MA0112 = ESR1

   CLUSTER 94

TCTCGCGAGA = NA

   CLUSTER 95

TGCGCGCGCA = NA


Generated on: Sun Jun 20 21:35:58 2010 - R2HTML